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Exploring Urinary EV Gene Expression for Early Detection of Bladder Cancer
College of Science: School of Systems Biology

Exploring Urinary EV Gene Expression for Early Detection of Bladder Cancer

Abstract

Bladder cancer is one of the most prevalent malignancies affecting the urinary system, where early detection plays a crucial role in improving clinical outcomes. Urinary extracellular vesicles (EVs), which contain molecular cargo such as mRNA, offer a promising non-invasive source of biomarkers in early diagnosis. In this study, we analyzed a gene expression dataset derived from urinary EVs to identify potential diagnostic markers for bladder cancer. The analysis focused on four genes: LASS2, GALNT, ARHGEF39, and FOXO3. Notably, LASS2 and GALNT1 are expressed in cancer patient EVs, whereas ARHGEF39 and FOXO3 were expressed only in non-cancer controls. All four genes have previously been implicated in tumor-related pathways. After filtering out low-variability probes, we performed bioinformatic analyses and visualized gene expression patterns using dimensionality reduction and clustering tools. The results revealed a clear separation between cancer-associated and non-cancer-associated gene groups, suggesting that LASS2 and GALNT1 may serve as reliable biomarkers for early-stage bladder cancer. This study highlights the potential of urinary EV-derived mRNA profiling as a powerful, non-invasive approach for cancer detection and patient stratification.

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, K., , D., , E. & , A., (2025) “Exploring Urinary EV Gene Expression for Early Detection of Bladder Cancer”, Journal of Student-Scientists' Research 7(1). doi: https://doi.org/10.13021/jssr2025.5273

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